SRR25457010 - Harmonia axyridis

Basic Information

Run: SRR25457010

Assay Type: AMPLICON

Biosample: SAMN36759190

Bytes: 12135037

Center Name: GANSU AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA1000108

Geographic Information

Country: China

Continent: Asia

Location Name: China: Gansu

Sample Information

Host: Harmonia axyridis

Isolation: -

Biosample Model: -

Collection Date: 2023-04-14

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download

OTU Sequences

FASTA file of OTU sequences

Download

FAPROTAX Report

Functional annotation of Amplicon

Download

VSEARCH Taxon

VSEARCH taxonomic composition classification

Download

QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR25457010

11.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 82

Chemoheterotrophy

Aerobic_Chemoheterotrophy 67

Aerobic_Chemoheterotrophy

Nitrate_Reduction 18

Nitrate_Reduction

Aromatic_Compound_Degradation 17

Aromatic_Compound_Degradation

Nitrate_Respiration 10

Nitrate_Respiration

Nitrogen_Respiration 10

Nitrogen_Respiration

Fermentation 9

Fermentation

Animal_Parasites_Or_Symbionts 9

Animal_Parasites_Or_Symbionts

Ureolysis 9

Ureolysis

Methanol_Oxidation 8

Methanol_Oxidation

Methylotrophy 8

Methylotrophy

Human_Pathogens_All 7

Human_Pathogens_All

Human_Associated 7

Human_Associated

Nitrate_Denitrification 5

Nitrate_Denitrification

Nitrite_Denitrification 5

Nitrite_Denitrification

Denitrification 5

Denitrification

Nitrite_Respiration 5

Nitrite_Respiration

Dark_Hydrogen_Oxidation 3

Dark_Hydrogen_Oxidation

Nitrogen_Fixation 2

Nitrogen_Fixation

Aliphatic_Non_Methane_Hydrocarbon_Degradation 2

Aliphatic_Non_Methane_Hydrocarbon_Degradation

Hydrocarbon_Degradation 2

Hydrocarbon_Degradation

Predatory_Or_Exoparasitic 2

Predatory_Or_Exoparasitic

Arsenate_Detoxification 1

Arsenate_Detoxification

Dissimilatory_Arsenate_Reduction 1

Dissimilatory_Arsenate_Reduction

Human_Pathogens_Nosocomia 1

Human_Pathogens_Nosocomia

Photosynthetic_Cyanobacteria 1

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 1

Oxygenic_Photoautotrophy

Photoautotrophy 1

Photoautotrophy

Phototrophy 1

Phototrophy

Plastic_Degradation 1

Plastic_Degradation

Back to Amplicons List

Back to Table