SRR24825908 - Litchi chinensis
Basic Information
Run: SRR24825908
Assay Type: AMPLICON
Biosample: SAMN35619093
Bytes: 16931456
Center Name: ICAR RESEARCH COMPLEX FOR EASTERN REGION ICAR PARISAR, P. O. BIHAR VETERINARY COLLEGE, PATNA, BIHAR
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA980004
Geographic Information
Country: India
Continent: Asia
Location Name: India
Latitude/Longitude: 23.75 N 85.50 E
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR24825908
16.1 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
74
Chemoheterotrophy
Aerobic_Chemoheterotrophy
60
Aerobic_Chemoheterotrophy
Fermentation
9
Fermentation
Ureolysis
7
Ureolysis
Animal_Parasites_Or_Symbionts
6
Animal_Parasites_Or_Symbionts
Human_Associated
5
Human_Associated
Aromatic_Compound_Degradation
5
Aromatic_Compound_Degradation
Methanol_Oxidation
4
Methanol_Oxidation
Methylotrophy
4
Methylotrophy
Aerobic_Ammonia_Oxidation
3
Aerobic_Ammonia_Oxidation
Nitrification
3
Nitrification
Human_Pathogens_All
3
Human_Pathogens_All
Nitrogen_Fixation
2
Nitrogen_Fixation
Human_Gut
2
Human_Gut
Mammal_Gut
2
Mammal_Gut
Nitrate_Reduction
2
Nitrate_Reduction
Photoheterotrophy
2
Photoheterotrophy
Phototrophy
2
Phototrophy
Plant_Pathogen
1
Plant_Pathogen
Anoxygenic_Photoautotrophy_H2_Oxidizing
1
Anoxygenic_Photoautotrophy_H2_Oxidizing
Anoxygenic_Photoautotrophy
1
Anoxygenic_Photoautotrophy
Photoautotrophy
1
Photoautotrophy
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