SRR24825904 - Litchi chinensis
Basic Information
Run: SRR24825904
Assay Type: AMPLICON
Biosample: SAMN35619096
Bytes: 20196138
Center Name: ICAR RESEARCH COMPLEX FOR EASTERN REGION ICAR PARISAR, P. O. BIHAR VETERINARY COLLEGE, PATNA, BIHAR
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA980004
Geographic Information
Country: India
Continent: Asia
Location Name: India
Latitude/Longitude: 23.75 N 85.50 E
Sample Information
Environmental Information
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR24825904
19.3 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
85
Chemoheterotrophy
Aerobic_Chemoheterotrophy
65
Aerobic_Chemoheterotrophy
Methylotrophy
12
Methylotrophy
Methanol_Oxidation
11
Methanol_Oxidation
Fermentation
11
Fermentation
Ureolysis
11
Ureolysis
Aromatic_Compound_Degradation
6
Aromatic_Compound_Degradation
Human_Associated
5
Human_Associated
Animal_Parasites_Or_Symbionts
5
Animal_Parasites_Or_Symbionts
Nitrogen_Fixation
4
Nitrogen_Fixation
Nitrate_Respiration
4
Nitrate_Respiration
Nitrate_Reduction
4
Nitrate_Reduction
Nitrogen_Respiration
4
Nitrogen_Respiration
Phototrophy
4
Phototrophy
Aerobic_Ammonia_Oxidation
3
Aerobic_Ammonia_Oxidation
Nitrification
3
Nitrification
Nitrate_Denitrification
3
Nitrate_Denitrification
Nitrite_Denitrification
3
Nitrite_Denitrification
Denitrification
3
Denitrification
Dark_Hydrogen_Oxidation
3
Dark_Hydrogen_Oxidation
Nitrite_Respiration
3
Nitrite_Respiration
Human_Pathogens_All
3
Human_Pathogens_All
Photosynthetic_Cyanobacteria
3
Photosynthetic_Cyanobacteria
Oxygenic_Photoautotrophy
3
Oxygenic_Photoautotrophy
Photoautotrophy
3
Photoautotrophy
Human_Gut
2
Human_Gut
Mammal_Gut
2
Mammal_Gut
Methanotrophy
1
Methanotrophy
Thiosulfate_Respiration
1
Thiosulfate_Respiration
Respiration_Of_Sulfur_Compounds
1
Respiration_Of_Sulfur_Compounds
Chitinolysis
1
Chitinolysis
Dark_Oxidation_Of_Sulfur_Compounds
1
Dark_Oxidation_Of_Sulfur_Compounds
Plant_Pathogen
1
Plant_Pathogen
Hydrocarbon_Degradation
1
Hydrocarbon_Degradation
Predatory_Or_Exoparasitic
1
Predatory_Or_Exoparasitic
Nonphotosynthetic_Cyanobacteria
1
Nonphotosynthetic_Cyanobacteria
Photoheterotrophy
1
Photoheterotrophy
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