SRR24565674 - Bathycoelia distincta

Basic Information

Run: SRR24565674

Assay Type: AMPLICON

Biosample: SAMN35091700

Bytes: 43103607

Center Name: UNIVERSITY OF PRETORIA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA972719

Geographic Information

Country: South Africa

Continent: Africa

Location Name: South Africa: Mpumalanga

Latitude/Longitude: 25.08 S 31.01 E

Sample Information

Host: Bathycoelia distincta

Isolation: -

Biosample Model: -

Collection Date: 2021-03-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR24565674
41.1 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 60
Fermentation 54
Nitrate_Reduction 27
Aerobic_Chemoheterotrophy 11
Animal_Parasites_Or_Symbionts 10
Aromatic_Compound_Degradation 5
Human_Pathogens_All 3
Human_Associated 3
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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