SRR24565669 - Bathycoelia distincta

Basic Information

Run: SRR24565669

Assay Type: AMPLICON

Biosample: SAMN35091704

Bytes: 85764900

Center Name: UNIVERSITY OF PRETORIA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA972719

Geographic Information

Country: South Africa

Continent: Africa

Location Name: South Africa: Mpumalanga

Latitude/Longitude: 25.08 S 31.01 E

Sample Information

Host: Bathycoelia distincta

Isolation: -

Biosample Model: -

Collection Date: 2021-03-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR24565669
81.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 35
Fermentation 24
Nitrate_Reduction 13
Aerobic_Chemoheterotrophy 10
Animal_Parasites_Or_Symbionts 7
Methanol_Oxidation 3
Methylotrophy 3
Human_Pathogens_All 3
Human_Associated 3
Ureolysis 3
Nitrogen_Fixation 2
Nitrate_Respiration 2
Nitrogen_Respiration 2
Aromatic_Compound_Degradation 1
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