SRR23086678 - Hybomitra sp.

Basic Information

Run: SRR23086678

Assay Type: AMPLICON

Biosample: SAMN30133294

Bytes: 2053844

Center Name: N. F. GAMALEYA FEDERAL RESEARCH CENTER OF EPIDEMIOLOGY AND MICROBIOLOGY, 123098 MOSCOW, RUSSIA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA865794

Geographic Information

Country: Russia

Continent: Europe

Location Name: Russia: Kamchatka Krai, Elizovsky District

Latitude/Longitude: 53.200000 N 158.266667 E

Sample Information

Host: Hybomitra sp.

Isolation: -

Biosample Model: -

Collection Date: 2021-08-05

Host Sex: male

Environmental Information

Broad Scale: ENVO:00000446 terrestrial biome

Local Scale: ENVO:01001199 terrestrial environmental zone

Medium: Forest

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR23086678
2.0 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

No functional annotation data available

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