SRR22888930 - Xylocopa caerulea

Basic Information

Run: SRR22888930

Assay Type: AMPLICON

Biosample: SAMN32395914

Bytes: 14124211

Center Name: CHINESE ACADEMY OF TROPICAL AGRICULTURAL SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA915489

Geographic Information

Country: China

Continent: Asia

Location Name: China:hainan

Latitude/Longitude: missing

Sample Information

Host: Xylocopa caerulea

Isolation: -

Biosample Model: -

Collection Date: 2022-04-04

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22888930
13.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 51
Aerobic_Chemoheterotrophy 24
Fermentation 21
Human_Associated 6
Animal_Parasites_Or_Symbionts 6
Methanol_Oxidation 5
Methylotrophy 5
Human_Pathogens_All 4
Aromatic_Compound_Degradation 4
Ureolysis 4
Human_Gut 3
Mammal_Gut 3
Nitrate_Reduction 2
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Chitinolysis 1
Nitrogen_Fixation 1
Nitrite_Respiration 1
Xylanolysis 1
Aromatic_Hydrocarbon_Degradation 1
Hydrocarbon_Degradation 1
Nitrate_Respiration 1
Nitrogen_Respiration 1
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