SRR22888926 - Xylocopa caerulea

Basic Information

Run: SRR22888926

Assay Type: AMPLICON

Biosample: SAMN32395918

Bytes: 13890149

Center Name: CHINESE ACADEMY OF TROPICAL AGRICULTURAL SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina NovaSeq 6000

Library Layout: PAIRED

Bioproject: PRJNA915489

Geographic Information

Country: China

Continent: Asia

Location Name: China:hainan

Latitude/Longitude: missing

Sample Information

Host: Xylocopa caerulea

Isolation: -

Biosample Model: -

Collection Date: 2022-04-13

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR22888926

13.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 38

Chemoheterotrophy

Fermentation 26

Fermentation

Aerobic_Chemoheterotrophy 9

Aerobic_Chemoheterotrophy

Photosynthetic_Cyanobacteria 4

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 4

Oxygenic_Photoautotrophy

Photoautotrophy 4

Photoautotrophy

Phototrophy 4

Phototrophy

Dark_Hydrogen_Oxidation 2

Dark_Hydrogen_Oxidation

Aromatic_Compound_Degradation 2

Aromatic_Compound_Degradation

Methanol_Oxidation 1

Methanol_Oxidation

Methylotrophy 1

Methylotrophy

Aerobic_Ammonia_Oxidation 1

Aerobic_Ammonia_Oxidation

Nitrification 1

Nitrification

Nitrate_Denitrification 1

Nitrate_Denitrification

Nitrite_Denitrification 1

Nitrite_Denitrification

Denitrification 1

Denitrification

Nitrogen_Fixation 1

Nitrogen_Fixation

Nitrite_Respiration 1

Nitrite_Respiration

Human_Pathogens_All 1

Human_Pathogens_All

Human_Associated 1

Human_Associated

Animal_Parasites_Or_Symbionts 1

Animal_Parasites_Or_Symbionts

Aromatic_Hydrocarbon_Degradation 1

Aromatic_Hydrocarbon_Degradation

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Nitrate_Respiration 1

Nitrate_Respiration

Nitrate_Reduction 1

Nitrate_Reduction

Nitrogen_Respiration 1

Nitrogen_Respiration

Ureolysis 1

Ureolysis

Reductive_Acetogenesis 1

Reductive_Acetogenesis

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