SRR22839860 - Drosophila nigrosparsa

Basic Information

Run: SRR22839860

Assay Type: AMPLICON

Biosample: SAMN32340381

Bytes: 28870500

Center Name: UNIVERSITY OF INNSBRUCK

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA914613

Geographic Information

Country: uncalculated

Continent: uncalculated

Location Name: not applicable

Latitude/Longitude: not applicable

Sample Information

Host: Drosophila nigrosparsa

Isolation: -

Biosample Model: -

Collection Date: 2020-01-01

Host Sex: -

Environmental Information

Broad Scale: Insect Gut Microbiota

Local Scale: digestive tract

Medium: digestive tract

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22839860
27.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 6
Aerobic_Chemoheterotrophy 5
Fermentation 1
Nitrate_Reduction 1
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