SRR22566705 - Strauzia (either S. vittigera or S. longitudinalis)

Basic Information

Run: SRR22566705

Assay Type: AMPLICON

Biosample: SAMN32096320

Bytes: 15126664

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Honey Creek

Latitude/Longitude: 41.421579 N 95.854282 W

Sample Information

Host: Strauzia (either S. vittigera or S. longitudinalis)

Isolation: -

Biosample Model: -

Collection Date: 2014-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566705
14.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 147
Nitrate_Reduction 98
Fermentation 97
Nitrite_Respiration 91
Animal_Parasites_Or_Symbionts 91
Nitrate_Respiration 91
Nitrogen_Respiration 91
Nitrate_Ammonification 90
Nitrite_Ammonification 90
Human_Pathogens_All 90
Human_Gut 90
Human_Associated 90
Mammal_Gut 90
Aerobic_Chemoheterotrophy 50
Intracellular_Parasites 4
Invertebrate_Parasites 1
Plastic_Degradation 1
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