SRR22566700 - Strauzia longipennis

Basic Information

Run: SRR22566700

Assay Type: AMPLICON

Biosample: SAMN32096325

Bytes: 12334489

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.653341 N 91.47998 W

Sample Information

Host: Strauzia longipennis

Isolation: -

Biosample Model: -

Collection Date: 2015-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566700
11.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 60
Aerobic_Chemoheterotrophy 35
Nitrate_Ammonification 25
Nitrite_Ammonification 25
Nitrite_Respiration 25
Fermentation 25
Human_Pathogens_All 25
Human_Gut 25
Human_Associated 25
Mammal_Gut 25
Animal_Parasites_Or_Symbionts 25
Nitrate_Respiration 25
Nitrate_Reduction 25
Nitrogen_Respiration 25
Intracellular_Parasites 8
Aromatic_Compound_Degradation 3
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