SRR22566698 - Strauzia longipennis

Basic Information

Run: SRR22566698

Assay Type: AMPLICON

Biosample: SAMN32096327

Bytes: 21774921

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Quality Control Information

Filter Percentage: 1.0

QC Average Length: 383

Retained Reads: 0

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.653341 N 91.47998 W

Sample Information

Host: Strauzia longipennis

Isolation: -

Biosample Model: -

Collection Date: 2015-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566698
20.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 198
Nitrate_Reduction 156
Fermentation 152
Animal_Parasites_Or_Symbionts 151
Nitrate_Respiration 151
Nitrogen_Respiration 151
Human_Pathogens_All 150
Human_Associated 150
Nitrite_Respiration 148
Nitrate_Ammonification 147
Nitrite_Ammonification 147
Human_Gut 147
Mammal_Gut 147
Aerobic_Chemoheterotrophy 46
Intracellular_Parasites 21
Invertebrate_Parasites 1
Plant_Pathogen 1
Aromatic_Compound_Degradation 1
Plastic_Degradation 1
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