SRR22566691 - Strauzia vittigera

Basic Information

Run: SRR22566691

Assay Type: AMPLICON

Biosample: SAMN32096333

Bytes: 14124237

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Quality Control Information

Filter Percentage: 1.0

QC Average Length: -

Retained Reads: 0

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.653341 N 91.47998 W

Sample Information

Host: Strauzia vittigera

Isolation: -

Biosample Model: -

Collection Date: 2015-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566691
13.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 98
Aerobic_Chemoheterotrophy 57
Fermentation 41
Nitrate_Reduction 38
Animal_Parasites_Or_Symbionts 37
Human_Pathogens_All 36
Human_Associated 36
Nitrate_Respiration 36
Nitrogen_Respiration 36
Nitrite_Respiration 35
Nitrate_Ammonification 34
Nitrite_Ammonification 34
Human_Gut 34
Mammal_Gut 34
Intracellular_Parasites 7
Invertebrate_Parasites 1
Plastic_Degradation 1
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