SRR22566656 - Ectemnius sp.

Basic Information

Run: SRR22566656

Assay Type: AMPLICON

Biosample: SAMN32096309

Bytes: 17146767

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.664662 N 91.584727 W

Sample Information

Host: Ectemnius sp.

Isolation: -

Biosample Model: -

Collection Date: 2021-05-26

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR22566656

16.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 197

Chemoheterotrophy

Aerobic_Chemoheterotrophy 132

Aerobic_Chemoheterotrophy

Fermentation 47

Fermentation

Nitrate_Reduction 43

Nitrate_Reduction

Animal_Parasites_Or_Symbionts 36

Animal_Parasites_Or_Symbionts

Human_Associated 34

Human_Associated

Human_Pathogens_All 30

Human_Pathogens_All

Ureolysis 26

Ureolysis

Nitrate_Respiration 23

Nitrate_Respiration

Nitrogen_Respiration 23

Nitrogen_Respiration

Human_Gut 17

Human_Gut

Mammal_Gut 17

Mammal_Gut

Methanol_Oxidation 16

Methanol_Oxidation

Methylotrophy 16

Methylotrophy

Aromatic_Compound_Degradation 15

Aromatic_Compound_Degradation

Nitrate_Ammonification 12

Nitrate_Ammonification

Nitrite_Ammonification 12

Nitrite_Ammonification

Nitrite_Respiration 12

Nitrite_Respiration

Intracellular_Parasites 5

Intracellular_Parasites

Nitrogen_Fixation 4

Nitrogen_Fixation

Invertebrate_Parasites 3

Invertebrate_Parasites

Chitinolysis 2

Chitinolysis

Human_Pathogens_Diarrhea 2

Human_Pathogens_Diarrhea

Oil_Bioremediation 2

Oil_Bioremediation

Predatory_Or_Exoparasitic 2

Predatory_Or_Exoparasitic

Cellulolysis 1

Cellulolysis

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Ligninolysis 1

Ligninolysis

Human_Pathogens_Septicemia 1

Human_Pathogens_Septicemia

Human_Pathogens_Pneumonia 1

Human_Pathogens_Pneumonia

Plant_Pathogen 1

Plant_Pathogen

Aliphatic_Non_Methane_Hydrocarbon_Degradation 1

Aliphatic_Non_Methane_Hydrocarbon_Degradation

Hydrocarbon_Degradation 1

Hydrocarbon_Degradation

Photoheterotrophy 1

Photoheterotrophy

Phototrophy 1

Phototrophy

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