SRR22566655 - Strauzia longipennis

Basic Information

Run: SRR22566655

Assay Type: AMPLICON

Biosample: SAMN32096229

Bytes: 19155253

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.664662 N 91.584727 W

Sample Information

Host: Strauzia longipennis

Isolation: -

Biosample Model: -

Collection Date: 2020-06-16

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566655
18.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 114
Nitrate_Reduction 69
Human_Pathogens_All 68
Human_Associated 68
Animal_Parasites_Or_Symbionts 68
Nitrate_Respiration 67
Nitrogen_Respiration 67
Fermentation 65
Nitrate_Ammonification 64
Nitrite_Ammonification 64
Nitrite_Respiration 64
Human_Gut 64
Mammal_Gut 64
Aerobic_Chemoheterotrophy 49
Intracellular_Parasites 27
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