SRR22566651 - Strauzia vittigera

Basic Information

Run: SRR22566651

Assay Type: AMPLICON

Biosample: SAMN32096312

Bytes: 11881039

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.664662 N 91.584727 W

Sample Information

Host: Strauzia vittigera

Isolation: -

Biosample Model: -

Collection Date: 2021-05-26

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566651
11.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 84
Human_Pathogens_All 63
Human_Associated 63
Animal_Parasites_Or_Symbionts 63
Nitrate_Reduction 63
Fermentation 62
Nitrate_Respiration 61
Nitrogen_Respiration 61
Nitrate_Ammonification 60
Nitrite_Ammonification 60
Nitrite_Respiration 60
Human_Gut 60
Mammal_Gut 60
Aerobic_Chemoheterotrophy 22
Intracellular_Parasites 5
Nitrogen_Fixation 2
Plant_Pathogen 2
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