SRR22566648 - Strauzia longipennis

Basic Information

Run: SRR22566648

Assay Type: AMPLICON

Biosample: SAMN32096316

Bytes: 23507108

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.664662 N 91.584727 W

Sample Information

Host: Strauzia longipennis

Isolation: -

Biosample Model: -

Collection Date: 2020-06-16

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566648
22.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 64
Aerobic_Chemoheterotrophy 42
Nitrate_Reduction 24
Animal_Parasites_Or_Symbionts 23
Fermentation 22
Human_Pathogens_All 22
Human_Associated 22
Nitrate_Respiration 22
Nitrogen_Respiration 22
Nitrite_Respiration 21
Nitrate_Ammonification 20
Nitrite_Ammonification 20
Human_Gut 20
Mammal_Gut 20
Intracellular_Parasites 13
Nitrogen_Fixation 2
Invertebrate_Parasites 1
Plant_Pathogen 1
Plastic_Degradation 1
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