SRR22566639 - Strauzia vittigera

Basic Information

Run: SRR22566639

Assay Type: AMPLICON

Biosample: SAMN32096342

Bytes: 12806549

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Honey Creek

Latitude/Longitude: 41.421579 N 95.854282 W

Sample Information

Host: Strauzia vittigera

Isolation: -

Biosample Model: -

Collection Date: 2014-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566639
12.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 83
Aerobic_Chemoheterotrophy 50
Animal_Parasites_Or_Symbionts 36
Nitrate_Reduction 36
Human_Associated 35
Nitrate_Respiration 35
Nitrogen_Respiration 35
Human_Pathogens_All 34
Nitrite_Respiration 33
Fermentation 33
Human_Gut 33
Mammal_Gut 33
Nitrate_Ammonification 32
Nitrite_Ammonification 32
Intracellular_Parasites 5
Plant_Pathogen 2
Invertebrate_Parasites 1
Plastic_Degradation 1
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