SRR22566635 - Strauzia longitudinalis

Basic Information

Run: SRR22566635

Assay Type: AMPLICON

Biosample: SAMN32096345

Bytes: 15223436

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Honey Creek

Latitude/Longitude: 41.421579 N 95.854282 W

Sample Information

Host: Strauzia longitudinalis

Isolation: -

Biosample Model: -

Collection Date: 2014-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566635
14.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 129
Nitrate_Reduction 81
Fermentation 76
Animal_Parasites_Or_Symbionts 73
Nitrate_Respiration 73
Nitrogen_Respiration 73
Human_Pathogens_All 72
Human_Associated 72
Nitrite_Respiration 68
Nitrate_Ammonification 67
Nitrite_Ammonification 67
Human_Gut 67
Mammal_Gut 67
Aerobic_Chemoheterotrophy 53
Plant_Pathogen 29
Intracellular_Parasites 9
Aromatic_Compound_Degradation 4
Invertebrate_Parasites 1
Plastic_Degradation 1
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