SRR22566632 - Strauzia intermedia

Basic Information

Run: SRR22566632

Assay Type: AMPLICON

Biosample: SAMN32096349

Bytes: 18401301

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Decorah

Latitude/Longitude: 43.30119 N 91.79077 W

Sample Information

Host: Strauzia intermedia

Isolation: -

Biosample Model: -

Collection Date: 2014-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566632
17.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 42
Fermentation 24
Intracellular_Parasites 24
Animal_Parasites_Or_Symbionts 23
Nitrate_Reduction 23
Human_Pathogens_All 22
Human_Associated 22
Nitrite_Respiration 21
Nitrate_Respiration 21
Nitrogen_Respiration 21
Nitrate_Ammonification 20
Nitrite_Ammonification 20
Human_Gut 20
Mammal_Gut 20
Aerobic_Chemoheterotrophy 18
Invertebrate_Parasites 1
Plastic_Degradation 1
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