SRR22566629 - Strauzia (either S. vittigera or S. longitudinalis)

Basic Information

Run: SRR22566629

Assay Type: AMPLICON

Biosample: SAMN32096350

Bytes: 20003656

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Honey Creek

Latitude/Longitude: 41.421579 N 95.854282 W

Sample Information

Host: Strauzia (either S. vittigera or S. longitudinalis)

Isolation: -

Biosample Model: -

Collection Date: 2014-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566629
19.1 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 247
Fermentation 140
Nitrate_Reduction 133
Nitrite_Respiration 125
Animal_Parasites_Or_Symbionts 125
Nitrate_Respiration 125
Nitrogen_Respiration 125
Nitrate_Ammonification 124
Nitrite_Ammonification 124
Human_Pathogens_All 124
Human_Gut 124
Human_Associated 124
Mammal_Gut 124
Aerobic_Chemoheterotrophy 107
Aromatic_Compound_Degradation 24
Intracellular_Parasites 5
Plant_Pathogen 2
Invertebrate_Parasites 1
Plastic_Degradation 1
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