SRR22566623 - Slaterocoris sp.

Basic Information

Run: SRR22566623

Assay Type: AMPLICON

Biosample: SAMN32096262

Bytes: 7952698

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.664662 N 91.584727 W

Sample Information

Host: Slaterocoris sp.

Isolation: -

Biosample Model: -

Collection Date: 2020-06-16

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566623
7.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 201
Nitrate_Reduction 123
Fermentation 119
Animal_Parasites_Or_Symbionts 113
Human_Pathogens_All 109
Human_Associated 109
Nitrate_Respiration 107
Nitrogen_Respiration 107
Nitrate_Ammonification 104
Nitrite_Ammonification 104
Nitrite_Respiration 104
Human_Gut 104
Mammal_Gut 104
Aerobic_Chemoheterotrophy 82
Intracellular_Parasites 35
Nitrogen_Fixation 5
Aromatic_Compound_Degradation 5
Plant_Pathogen 3
Ureolysis 3
Methanol_Oxidation 2
Methylotrophy 2
Invertebrate_Parasites 2
Arsenate_Detoxification 1
Dissimilatory_Arsenate_Reduction 1
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