SRR22566601 - Strauzia longitudinalis

Basic Information

Run: SRR22566601

Assay Type: AMPLICON

Biosample: SAMN32096358

Bytes: 17511919

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Honey Creek

Latitude/Longitude: 41.421579 N 95.854282 W

Sample Information

Host: Strauzia longitudinalis

Isolation: -

Biosample Model: -

Collection Date: 2014-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566601
16.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 95
Aerobic_Chemoheterotrophy 59
Nitrate_Reduction 38
Fermentation 36
Animal_Parasites_Or_Symbionts 34
Nitrate_Respiration 34
Nitrogen_Respiration 34
Nitrite_Respiration 33
Human_Pathogens_All 33
Human_Associated 33
Nitrate_Ammonification 32
Nitrite_Ammonification 32
Human_Gut 32
Mammal_Gut 32
Intracellular_Parasites 8
Plant_Pathogen 2
Invertebrate_Parasites 1
Aromatic_Compound_Degradation 1
Plastic_Degradation 1
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