SRR22566596 - Strauzia vittigera strumosus

Basic Information

Run: SRR22566596

Assay Type: AMPLICON

Biosample: SAMN32096363

Bytes: 33458110

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: St. Charles

Latitude/Longitude: 41.913994 N 88.360007 W

Sample Information

Host: Strauzia vittigera strumosus

Isolation: -

Biosample Model: -

Collection Date: 2019-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566596
31.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 160
Fermentation 135
Nitrate_Reduction 134
Human_Pathogens_All 121
Human_Associated 121
Animal_Parasites_Or_Symbionts 121
Nitrate_Ammonification 118
Nitrite_Ammonification 118
Nitrite_Respiration 118
Human_Gut 118
Mammal_Gut 118
Nitrate_Respiration 118
Nitrogen_Respiration 118
Intracellular_Parasites 38
Aerobic_Chemoheterotrophy 25
Aromatic_Compound_Degradation 4
Plant_Pathogen 1
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