SRR22566595 - Strauzia longitudinalis

Basic Information

Run: SRR22566595

Assay Type: AMPLICON

Biosample: SAMN32096364

Bytes: 19107925

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Cincinnati

Latitude/Longitude: 39.264541 N 84.537734 W

Sample Information

Host: Strauzia longitudinalis

Isolation: -

Biosample Model: -

Collection Date: 2021-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566595
18.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 105
Fermentation 72
Nitrate_Reduction 70
Human_Pathogens_All 69
Human_Associated 69
Animal_Parasites_Or_Symbionts 69
Nitrate_Respiration 69
Nitrogen_Respiration 69
Nitrate_Ammonification 68
Nitrite_Ammonification 68
Nitrite_Respiration 68
Human_Gut 68
Mammal_Gut 68
Aerobic_Chemoheterotrophy 32
Intracellular_Parasites 17
Methanol_Oxidation 1
Methylotrophy 1
Plant_Pathogen 1
Ureolysis 1
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