SRR22566591 - Strauzia longitudinalis

Basic Information

Run: SRR22566591

Assay Type: AMPLICON

Biosample: SAMN32096367

Bytes: 18704064

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Quality Control Information

Filter Percentage: 1.0

QC Average Length: -

Retained Reads: 0

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Cincinnati

Latitude/Longitude: 39.264541 N 84.537734 W

Sample Information

Host: Strauzia longitudinalis

Isolation: -

Biosample Model: -

Collection Date: 2021-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566591
17.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 137
Fermentation 69
Aerobic_Chemoheterotrophy 67
Human_Pathogens_All 59
Human_Associated 59
Animal_Parasites_Or_Symbionts 59
Nitrate_Reduction 59
Nitrate_Ammonification 58
Nitrite_Ammonification 58
Nitrite_Respiration 58
Human_Gut 58
Mammal_Gut 58
Nitrate_Respiration 58
Nitrogen_Respiration 58
Intracellular_Parasites 22
Methanol_Oxidation 1
Methylotrophy 1
Aromatic_Compound_Degradation 1
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