SRR22566575 - Homoneura sp.

Basic Information

Run: SRR22566575

Assay Type: AMPLICON

Biosample: SAMN32096285

Bytes: 20528757

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.664662 N 91.584727 W

Sample Information

Host: Homoneura sp.

Isolation: -

Biosample Model: -

Collection Date: 2020-06-16

Host Sex: -

Environmental Information

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

Download
OTU Sequences

FASTA file of OTU sequences

Download
FAPROTAX Report

Functional annotation of Amplicon

Download
VSEARCH Taxon

VSEARCH taxonomic composition classification

Download
QIIME Taxon

QIIME2 taxonomic composition classification

Download

Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566575
19.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 21
Human_Pathogens_All 15
Human_Associated 15
Animal_Parasites_Or_Symbionts 15
Nitrate_Ammonification 14
Nitrite_Ammonification 14
Nitrite_Respiration 14
Fermentation 14
Human_Gut 14
Mammal_Gut 14
Nitrate_Respiration 14
Nitrate_Reduction 14
Nitrogen_Respiration 14
Aerobic_Chemoheterotrophy 7
Intracellular_Parasites 2
Nitrogen_Fixation 1
Back to Amplicons List
Back to Table