SRR22566571 - Strauzia longitudinalis

Basic Information

Run: SRR22566571

Assay Type: AMPLICON

Biosample: SAMN32096227

Bytes: 14230004

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.664662 N 91.584727 W

Sample Information

Host: Strauzia longitudinalis

Isolation: -

Biosample Model: -

Collection Date: 2020-06-16

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566571
13.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 190
Aerobic_Chemoheterotrophy 103
Fermentation 87
Nitrate_Reduction 86
Human_Pathogens_All 67
Human_Associated 67
Animal_Parasites_Or_Symbionts 67
Nitrate_Respiration 67
Nitrogen_Respiration 67
Nitrate_Ammonification 64
Nitrite_Ammonification 64
Nitrite_Respiration 64
Human_Gut 64
Mammal_Gut 64
Intracellular_Parasites 3
Plant_Pathogen 2
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