SRR22566570 - Strauzia longitudinalis

Basic Information

Run: SRR22566570

Assay Type: AMPLICON

Biosample: SAMN32096293

Bytes: 6756145

Center Name: UNIVERSITY OF IOWA

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909794

Geographic Information

Country: USA

Continent: North America

Location Name: USA: Iowa City

Latitude/Longitude: 41.664662 N 91.584727 W

Sample Information

Host: Strauzia longitudinalis

Isolation: -

Biosample Model: -

Collection Date: 2021-05-26

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22566570
6.4 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 148
Aerobic_Chemoheterotrophy 94
Nitrate_Reduction 49
Fermentation 37
Human_Pathogens_All 37
Human_Associated 37
Animal_Parasites_Or_Symbionts 37
Nitrate_Respiration 33
Nitrogen_Respiration 33
Nitrate_Ammonification 29
Nitrite_Ammonification 29
Nitrite_Respiration 29
Human_Gut 29
Mammal_Gut 29
Intracellular_Parasites 19
Methylotrophy 17
Methanol_Oxidation 14
Nitrogen_Fixation 12
Ureolysis 12
Plant_Pathogen 5
Aromatic_Compound_Degradation 5
Methanotrophy 3
Human_Pathogens_Septicemia 3
Human_Pathogens_Pneumonia 3
Hydrocarbon_Degradation 3
Dark_Oxidation_Of_Sulfur_Compounds 1
Predatory_Or_Exoparasitic 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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