SRR22557522 - Musca domestica

Basic Information

Run: SRR22557522

Assay Type: WCS

Biosample: SAMN32082908

Bytes: 22295771

Center Name: SCHOOL OF CLINICAL AND BASIC MEDICAL SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA909407

Geographic Information

Country: China

Continent: Asia

Location Name: China: Shandong,Jinan

Latitude/Longitude: not applicable

Sample Information

Host: Musca domestica

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR22557522
21.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 37
Aerobic_Chemoheterotrophy 28
Nitrate_Reduction 21
Fermentation 15
Human_Pathogens_All 15
Human_Associated 15
Animal_Parasites_Or_Symbionts 15
Nitrate_Respiration 10
Nitrogen_Respiration 10
Ureolysis 4
Human_Pathogens_Septicemia 3
Human_Pathogens_Diarrhea 3
Human_Pathogens_Pneumonia 2
Human_Gut 2
Mammal_Gut 2
Plant_Pathogen 1
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