SRR21660797 - Macrotermes subhyalinus

Basic Information

Run: SRR21660797

Assay Type: AMPLICON

Biosample: SAMN30890275

Bytes: 248395440

Center Name: INSTITUTE OF ECOLOGY AND ENVIRONMENTAL SCIENCES, PARIS (IEES PARIS)

Classification: 16S

Sequencing Information

Instrument: HiSeq X Five

Library Layout: PAIRED

Bioproject: PRJNA347254

Geographic Information

Country: Senegal

Continent: Africa

Location Name: Senegal

Latitude/Longitude: 14.0667 N 16.5833 W

Sample Information

Host: Macrotermes subhyalinus

Isolation: -

Biosample Model: -

Collection Date: 2018-07-30

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR21660797
236.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 59
Fermentation 50
Nitrate_Reduction 23
Nonphotosynthetic_Cyanobacteria 14
Aerobic_Chemoheterotrophy 10
Human_Associated 8
Animal_Parasites_Or_Symbionts 8
Human_Pathogens_All 6
Respiration_Of_Sulfur_Compounds 5
Sulfur_Respiration 4
Thiosulfate_Respiration 4
Dark_Hydrogen_Oxidation 4
Cellulolysis 4
Human_Gut 4
Mammal_Gut 4
Nitrate_Respiration 4
Nitrogen_Respiration 4
Nitrate_Ammonification 2
Nitrite_Ammonification 2
Nitrite_Respiration 2
Sulfate_Respiration 1
Sulfite_Respiration 1
Ureolysis 1
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