SRR21528395 - Corcyra cephalonica

Basic Information

Run: SRR21528395

Assay Type: AMPLICON

Biosample: SAMN29883235

Bytes: 18873252

Center Name: TAMIL NADU AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: MinION

Library Layout: SINGLE

Bioproject: PRJNA861091

Geographic Information

Country: India

Continent: Asia

Location Name: India: Tamil Nadu, Coimbatore, TNAU, Insectory

Latitude/Longitude: 11.016308 N 76.929416 E

Sample Information

Host: Corcyra cephalonica

Isolation: -

Biosample Model: -

Collection Date: 2022-04-11

Host Sex: -

Environmental Information

Broad Scale: Insect Gut

Local Scale: Gut

Medium: Insect

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR21528395
18.0 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

No functional annotation data available

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