SRR21209037 - Hermetia illucens

Basic Information

Run: SRR21209037

Assay Type: AMPLICON

Biosample: SAMN30508029

Bytes: 6421768

Center Name: UNIVERSITY OF NAPLES FEDERICO II

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA873906

Quality Control Information

Filter Percentage: 0.0064

QC Average Length: 250

Retained Reads: 77172

Geographic Information

Country: Italy

Continent: Europe

Location Name: Italy

Sample Information

Host: Hermetia illucens

Isolation: -

Biosample Model: -

Collection Date: 1905-07-12

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR21209037
6.1 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 51
Aerobic_Chemoheterotrophy 38
Fermentation 12
Nitrate_Reduction 10
Human_Pathogens_All 8
Human_Associated 8
Animal_Parasites_Or_Symbionts 8
Aromatic_Compound_Degradation 6
Nitrate_Respiration 6
Nitrogen_Respiration 6
Ureolysis 4
Methanol_Oxidation 3
Methylotrophy 3
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Dark_Hydrogen_Oxidation 1
Nitrogen_Fixation 1
Nitrite_Respiration 1
Human_Pathogens_Septicemia 1
Human_Pathogens_Pneumonia 1
Human_Pathogens_Diarrhea 1
Human_Gut 1
Mammal_Gut 1
Plant_Pathogen 1
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