SRR21195520 - Aedes albopictus

Basic Information

Run: SRR21195520

Assay Type: WGS

Biosample: SAMN30491020

Bytes: 31260485

Center Name: PEST CONTROL DEPARTMENT

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA873190

Geographic Information

Country: China

Continent: Asia

Location Name: China:Beijing

Latitude/Longitude: 39.54 N 116.25 E

Sample Information

Host: Aedes albopictus

Isolation: -

Biosample Model: -

Collection Date: 2022-05-18

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR21195520

29.8 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 122

Chemoheterotrophy

Aerobic_Chemoheterotrophy 100

Aerobic_Chemoheterotrophy

Methylotrophy 18

Methylotrophy

Phototrophy 17

Phototrophy

Methanol_Oxidation 14

Methanol_Oxidation

Nitrogen_Fixation 14

Nitrogen_Fixation

Photoautotrophy 14

Photoautotrophy

Photosynthetic_Cyanobacteria 13

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 13

Oxygenic_Photoautotrophy

Ureolysis 13

Ureolysis

Methanotrophy 4

Methanotrophy

Xylanolysis 4

Xylanolysis

Hydrocarbon_Degradation 4

Hydrocarbon_Degradation

Photoheterotrophy 4

Photoheterotrophy

Intracellular_Parasites 3

Intracellular_Parasites

Fermentation 2

Fermentation

Human_Associated 2

Human_Associated

Animal_Parasites_Or_Symbionts 2

Animal_Parasites_Or_Symbionts

Nitrate_Denitrification 1

Nitrate_Denitrification

Nitrite_Denitrification 1

Nitrite_Denitrification

Denitrification 1

Denitrification

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Nitrite_Respiration 1

Nitrite_Respiration

Manganese_Oxidation 1

Manganese_Oxidation

Human_Pathogens_All 1

Human_Pathogens_All

Human_Gut 1

Human_Gut

Mammal_Gut 1

Mammal_Gut

Aromatic_Compound_Degradation 1

Aromatic_Compound_Degradation

Nitrate_Respiration 1

Nitrate_Respiration

Nitrate_Reduction 1

Nitrate_Reduction

Nitrogen_Respiration 1

Nitrogen_Respiration

Anoxygenic_Photoautotrophy_S_Oxidizing 1

Anoxygenic_Photoautotrophy_S_Oxidizing

Anoxygenic_Photoautotrophy 1

Anoxygenic_Photoautotrophy

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