SRR21195516 - Aedes albopictus

Basic Information

Run: SRR21195516

Assay Type: WGS

Biosample: SAMN30491024

Bytes: 30624430

Center Name: PEST CONTROL DEPARTMENT

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA873190

Geographic Information

Country: China

Continent: Asia

Location Name: China:Beijing

Latitude/Longitude: 39.54 N 116.25 E

Sample Information

Host: Aedes albopictus

Isolation: -

Biosample Model: -

Collection Date: 2022-05-18

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR21195516
29.2 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 111
Aerobic_Chemoheterotrophy 89
Phototrophy 19
Photoautotrophy 17
Methylotrophy 16
Nitrogen_Fixation 16
Photosynthetic_Cyanobacteria 16
Oxygenic_Photoautotrophy 16
Methanol_Oxidation 11
Ureolysis 11
Methanotrophy 5
Xylanolysis 5
Fermentation 5
Hydrocarbon_Degradation 5
Intracellular_Parasites 3
Photoheterotrophy 3
Human_Associated 2
Animal_Parasites_Or_Symbionts 2
Cellulolysis 1
Human_Pathogens_All 1
Human_Gut 1
Mammal_Gut 1
Aromatic_Compound_Degradation 1
Anoxygenic_Photoautotrophy_S_Oxidizing 1
Anoxygenic_Photoautotrophy 1
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