SRR21195504 - Aedes albopictus

Basic Information

Run: SRR21195504

Assay Type: WGS

Biosample: SAMN30491035

Bytes: 36557013

Center Name: PEST CONTROL DEPARTMENT

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA873190

Geographic Information

Country: China

Continent: Asia

Location Name: China:Beijing

Latitude/Longitude: 39.54 N 116.25 E

Sample Information

Host: Aedes albopictus

Isolation: -

Biosample Model: -

Collection Date: 2022-05-18

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR21195504

34.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 125

Chemoheterotrophy

Aerobic_Chemoheterotrophy 101

Aerobic_Chemoheterotrophy

Methylotrophy 18

Methylotrophy

Nitrogen_Fixation 15

Nitrogen_Fixation

Methanol_Oxidation 13

Methanol_Oxidation

Phototrophy 13

Phototrophy

Photoautotrophy 12

Photoautotrophy

Ureolysis 12

Ureolysis

Photosynthetic_Cyanobacteria 11

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 11

Oxygenic_Photoautotrophy

Fermentation 7

Fermentation

Xylanolysis 6

Xylanolysis

Methanotrophy 5

Methanotrophy

Human_Associated 5

Human_Associated

Animal_Parasites_Or_Symbionts 5

Animal_Parasites_Or_Symbionts

Hydrocarbon_Degradation 5

Hydrocarbon_Degradation

Human_Gut 4

Human_Gut

Mammal_Gut 4

Mammal_Gut

Intracellular_Parasites 4

Intracellular_Parasites

Photoheterotrophy 2

Photoheterotrophy

Nitrate_Denitrification 1

Nitrate_Denitrification

Nitrite_Denitrification 1

Nitrite_Denitrification

Denitrification 1

Denitrification

Dark_Hydrogen_Oxidation 1

Dark_Hydrogen_Oxidation

Nitrite_Respiration 1

Nitrite_Respiration

Cellulolysis 1

Cellulolysis

Human_Pathogens_All 1

Human_Pathogens_All

Nitrate_Respiration 1

Nitrate_Respiration

Nitrate_Reduction 1

Nitrate_Reduction

Nitrogen_Respiration 1

Nitrogen_Respiration

Anoxygenic_Photoautotrophy_S_Oxidizing 1

Anoxygenic_Photoautotrophy_S_Oxidizing

Anoxygenic_Photoautotrophy 1

Anoxygenic_Photoautotrophy

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