SRR21079109 - Spodoptera frugiperda

Basic Information

Run: SRR21079109

Assay Type: AMPLICON

Biosample: SAMN30294313

Bytes: 20653477

Center Name: HEBEI AGRICULTURAL UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA869195

Geographic Information

Country: China

Continent: Asia

Location Name: China:BaoDing

Latitude/Longitude: missing

Sample Information

Host: Spodoptera frugiperda

Isolation: -

Biosample Model: -

Collection Date: missing

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR21079109
19.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 14
Aerobic_Chemoheterotrophy 13
Aromatic_Compound_Degradation 3
Human_Pathogens_All 2
Human_Associated 2
Animal_Parasites_Or_Symbionts 2
Nitrate_Respiration 2
Nitrate_Reduction 2
Nitrogen_Respiration 2
Fermentation 1
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