SRR20001337 - Acipenser fulvescens
Basic Information
Run: SRR20001337
Assay Type: AMPLICON
Biosample: SAMN29488109
Bytes: 31856511
Center Name: MICHIGAN STATE UNIVERSITY
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA855298
Geographic Information
Country: USA
Continent: North America
Location Name: USA: Cheboygan
Latitude/Longitude: 45.3917 N 84.3328 W
Sample Information
Environmental Information
Broad Scale: not applicable
Local Scale: not applicable
Medium: not applicable
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR20001337
30.4 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
121
Chemoheterotrophy
Aerobic_Chemoheterotrophy
88
Aerobic_Chemoheterotrophy
Phototrophy
28
Phototrophy
Photosynthetic_Cyanobacteria
25
Photosynthetic_Cyanobacteria
Oxygenic_Photoautotrophy
25
Oxygenic_Photoautotrophy
Photoautotrophy
25
Photoautotrophy
Methylotrophy
22
Methylotrophy
Methanol_Oxidation
16
Methanol_Oxidation
Nitrate_Reduction
12
Nitrate_Reduction
Fermentation
10
Fermentation
Hydrocarbon_Degradation
7
Hydrocarbon_Degradation
Methanotrophy
6
Methanotrophy
Animal_Parasites_Or_Symbionts
6
Animal_Parasites_Or_Symbionts
Ureolysis
6
Ureolysis
Human_Pathogens_All
5
Human_Pathogens_All
Human_Associated
5
Human_Associated
Nitrate_Respiration
5
Nitrate_Respiration
Nitrogen_Respiration
5
Nitrogen_Respiration
Intracellular_Parasites
4
Intracellular_Parasites
Nitrogen_Fixation
3
Nitrogen_Fixation
Aromatic_Compound_Degradation
3
Aromatic_Compound_Degradation
Photoheterotrophy
3
Photoheterotrophy
Dark_Hydrogen_Oxidation
2
Dark_Hydrogen_Oxidation
Dark_Oxidation_Of_Sulfur_Compounds
2
Dark_Oxidation_Of_Sulfur_Compounds
Aerobic_Ammonia_Oxidation
1
Aerobic_Ammonia_Oxidation
Nitrification
1
Nitrification
Nitrate_Denitrification
1
Nitrate_Denitrification
Nitrite_Denitrification
1
Nitrite_Denitrification
Denitrification
1
Denitrification
Nitrite_Respiration
1
Nitrite_Respiration
Dark_Sulfur_Oxidation
1
Dark_Sulfur_Oxidation
Dark_Thiosulfate_Oxidation
1
Dark_Thiosulfate_Oxidation
Predatory_Or_Exoparasitic
1
Predatory_Or_Exoparasitic
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