SRR19449865 - Psylliodes attenuatus

Basic Information

Run: SRR19449865

Assay Type: AMPLICON

Biosample: SAMN28772396

Bytes: 35739732

Center Name: INSTITUTE OF BAST FIBER CROPS CHINESE ACADEMY OF AGRICULTURAL SCIENCES

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA843905

Geographic Information

Country: China

Continent: Asia

Location Name: China: Shandong, Taian

Latitude/Longitude: 35.97 N 116.97 E

Sample Information

Host: Psylliodes attenuatus

Isolation: -

Biosample Model: -

Collection Date: 2019-08-25

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR19449865
34.1 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 63
Fermentation 60
Animal_Parasites_Or_Symbionts 19
Human_Gut 16
Human_Associated 16
Mammal_Gut 16
Aerobic_Chemoheterotrophy 4
Ureolysis 4
Nitrate_Reduction 3
Intracellular_Parasites 3
Nitrogen_Fixation 2
Aromatic_Compound_Degradation 2
Nitrogen_Respiration 2
Sulfate_Respiration 1
Respiration_Of_Sulfur_Compounds 1
Nitrite_Ammonification 1
Nitrite_Respiration 1
Xylanolysis 1
Aromatic_Hydrocarbon_Degradation 1
Hydrocarbon_Degradation 1
Nitrate_Respiration 1
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