SRR18635380 - Cerartitis capitata

Basic Information

Run: SRR18635380

Assay Type: AMPLICON

Biosample: SAMN27302675

Bytes: 36144459

Center Name: UNIVERSITY OF PATRAS

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: SINGLE

Bioproject: PRJNA822871

Geographic Information

Country: Austria

Continent: Europe

Location Name: Austria:Seibersdorf

Latitude/Longitude: 47.58 N 16.31 E

Sample Information

Host: Cerartitis capitata

Isolation: -

Biosample Model: -

Collection Date: 2024-01-19

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA

Run ID File Size

SRR18635380

34.5 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 51

Chemoheterotrophy

Aerobic_Chemoheterotrophy 30

Aerobic_Chemoheterotrophy

Fermentation 17

Fermentation

Nitrate_Reduction 13

Nitrate_Reduction

Human_Associated 10

Human_Associated

Animal_Parasites_Or_Symbionts 10

Animal_Parasites_Or_Symbionts

Human_Pathogens_All 8

Human_Pathogens_All

Nitrogen_Respiration 7

Nitrogen_Respiration

Ureolysis 7

Ureolysis

Nitrate_Respiration 6

Nitrate_Respiration

Aromatic_Compound_Degradation 5

Aromatic_Compound_Degradation

Nitrogen_Fixation 3

Nitrogen_Fixation

Human_Gut 3

Human_Gut

Mammal_Gut 3

Mammal_Gut

Phototrophy 3

Phototrophy

Methanol_Oxidation 2

Methanol_Oxidation

Methylotrophy 2

Methylotrophy

Human_Pathogens_Nosocomia 2

Human_Pathogens_Nosocomia

Aromatic_Hydrocarbon_Degradation 2

Aromatic_Hydrocarbon_Degradation

Hydrocarbon_Degradation 2

Hydrocarbon_Degradation

Photosynthetic_Cyanobacteria 2

Photosynthetic_Cyanobacteria

Oxygenic_Photoautotrophy 2

Oxygenic_Photoautotrophy

Photoautotrophy 2

Photoautotrophy

Nitrite_Ammonification 1

Nitrite_Ammonification

Nitrite_Respiration 1

Nitrite_Respiration

Dark_Oxidation_Of_Sulfur_Compounds 1

Dark_Oxidation_Of_Sulfur_Compounds

Manganese_Oxidation 1

Manganese_Oxidation

Plant_Pathogen 1

Plant_Pathogen

Iron_Respiration 1

Iron_Respiration

Nonphotosynthetic_Cyanobacteria 1

Nonphotosynthetic_Cyanobacteria

Photoheterotrophy 1

Photoheterotrophy

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