SRR18635370 - Cerartitis capitata

Basic Information

Run: SRR18635370

Assay Type: AMPLICON

Biosample: SAMN27302693

Bytes: 16375841

Center Name: UNIVERSITY OF PATRAS

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: SINGLE

Bioproject: PRJNA822871

Geographic Information

Country: Spain

Continent: Europe

Location Name: Spain:Valencia

Latitude/Longitude: 39.520895 N 0.334336 W

Sample Information

Host: Cerartitis capitata

Isolation: -

Biosample Model: -

Collection Date: 1905-07-11

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR18635370
15.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 47
Aerobic_Chemoheterotrophy 27
Fermentation 21
Animal_Parasites_Or_Symbionts 10
Nitrate_Reduction 9
Human_Associated 7
Human_Pathogens_All 6
Aromatic_Compound_Degradation 5
Ureolysis 3
Human_Gut 2
Mammal_Gut 2
Nitrate_Respiration 2
Nitrogen_Respiration 2
Methanol_Oxidation 1
Methylotrophy 1
Human_Pathogens_Nosocomia 1
Aromatic_Hydrocarbon_Degradation 1
Hydrocarbon_Degradation 1
Intracellular_Parasites 1
Photosynthetic_Cyanobacteria 1
Oxygenic_Photoautotrophy 1
Photoautotrophy 1
Phototrophy 1
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