SRR17914777 - Arctia plantaginis

Basic Information

Run: SRR17914777

Assay Type: AMPLICON

Biosample: SAMN25704274

Bytes: 4803060

Center Name: UNIVERSITY OF JYVASKYLA

Classification: 16S

Sequencing Information

Instrument: Sequel

Library Layout: SINGLE

Bioproject: PRJNA804133

Geographic Information

Country: Finland

Continent: Europe

Location Name: Finland: Jyvaskyla

Latitude/Longitude: 62.24 N 25.74 E

Sample Information

Host: Arctia plantaginis

Isolation: -

Biosample Model: -

Collection Date: 2019-01-01

Host Sex: male

Environmental Information

Broad Scale: laboratory environment

Local Scale: insect-associated habitat

Medium: bodily fluid

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR17914777
4.6 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 2
Methanol_Oxidation 1
Methylotrophy 1
Aerobic_Chemoheterotrophy 1
Ureolysis 1
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