SRR17168945 - Basilia andersoni

Basic Information

Run: SRR17168945

Assay Type: AMPLICON

Biosample: SAMN23757879

Bytes: 18989811

Center Name: AMERICAN MUSEUM OF NATURAL HISTORY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA786937

Geographic Information

Country: Brazil

Continent: South America

Location Name: Brazil:Sao Paulo State

Latitude/Longitude: 23.1611496 S 45.457272 W

Sample Information

Host: Basilia andersoni

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: male

Environmental Information

Broad Scale: tropical dry broadleaf forest

Local Scale: insect-associated habitat

Medium: organic material

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR17168945
18.1 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Intracellular_Parasites 4
Invertebrate_Parasites 1
Animal_Parasites_Or_Symbionts 1
Nitrate_Reduction 1
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