SRR17168928 - Megistopoda proxima

Basic Information

Run: SRR17168928

Assay Type: AMPLICON

Biosample: SAMN23758012

Bytes: 24041079

Center Name: AMERICAN MUSEUM OF NATURAL HISTORY

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA786937

Geographic Information

Country: Brazil

Continent: South America

Location Name: Brazil:Rio do Janeiro State

Latitude/Longitude: 22.4653 S 42.7583 W

Sample Information

Host: Megistopoda proxima

Isolation: -

Biosample Model: -

Collection Date: -

Host Sex: male

Environmental Information

Broad Scale: tropical dry broadleaf forest

Local Scale: insect-associated habitat

Medium: organic material

Download Files

Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR17168928
22.9 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

No functional annotation data available

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