SRR16763528 - Micraspis discolor

Basic Information

Run: SRR16763528

Assay Type: AMPLICON

Biosample: SAMN22853518

Bytes: 13713351

Center Name: SUN YAT-SEN UNIVERSITY

Classification: 16S

Sequencing Information

Instrument: Illumina HiSeq 2500

Library Layout: PAIRED

Bioproject: PRJNA776093

Quality Control Information

Filter Percentage: 1.0

QC Average Length: -

Retained Reads: 0

Geographic Information

Country: China

Continent: Asia

Location Name: China: Guangzhou

Latitude/Longitude: missing

Sample Information

Host: Micraspis discolor

Isolation: -

Biosample Model: -

Collection Date: 2020-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR16763528
13.1 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Chemoheterotrophy 11
Aerobic_Chemoheterotrophy 9
Nitrogen_Fixation 2
Fermentation 2
Ureolysis 2
Methanol_Oxidation 1
Methylotrophy 1
Iron_Respiration 1
Nitrate_Respiration 1
Nitrate_Reduction 1
Nitrogen_Respiration 1
Fumarate_Respiration 1
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