SRR1660077 - Bombus terrestris

Basic Information

Run: SRR1660077

Assay Type: AMPLICON

Biosample: SAMN03167959

Bytes: 23767087

Center Name: UGENT

Classification: 16S

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA266577

Quality Control Information

Filter Percentage: 0.8

QC Average Length: 151

Retained Reads: 53620

Geographic Information

Country: Belgium

Continent: Europe

Location Name: Belgium

Latitude/Longitude: 51.13 N 4.89 W

Sample Information

Host: Bombus terrestris

Isolation: -

Biosample Model: -

Collection Date: 2024-12-12

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR1660077
22.7 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Fermentation 1
Chemoheterotrophy 1
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