SRR16109791 - Dicentrarchus labrax
Basic Information
Run: SRR16109791
Assay Type: AMPLICON
Biosample: SAMN21893821
Bytes: 2409180
Center Name: JMF
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA767204
Geographic Information
Country: Portugal
Continent: Europe
Location Name: Portugal: Porto
Latitude/Longitude: 41.1636 N 8.6866 W
Sample Information
Environmental Information
Broad Scale: fish
Local Scale: gut
Medium: gut digesta
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR16109791
2.3 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
14
Chemoheterotrophy
Aerobic_Chemoheterotrophy
9
Aerobic_Chemoheterotrophy
Aromatic_Compound_Degradation
5
Aromatic_Compound_Degradation
Fermentation
4
Fermentation
Nitrogen_Fixation
2
Nitrogen_Fixation
Ureolysis
2
Ureolysis
Methanol_Oxidation
1
Methanol_Oxidation
Methylotrophy
1
Methylotrophy
Human_Pathogens_Nosocomia
1
Human_Pathogens_Nosocomia
Human_Pathogens_All
1
Human_Pathogens_All
Human_Associated
1
Human_Associated
Animal_Parasites_Or_Symbionts
1
Animal_Parasites_Or_Symbionts
Aromatic_Hydrocarbon_Degradation
1
Aromatic_Hydrocarbon_Degradation
Hydrocarbon_Degradation
1
Hydrocarbon_Degradation
Nitrate_Reduction
1
Nitrate_Reduction
Nonphotosynthetic_Cyanobacteria
1
Nonphotosynthetic_Cyanobacteria
Photosynthetic_Cyanobacteria
1
Photosynthetic_Cyanobacteria
Oxygenic_Photoautotrophy
1
Oxygenic_Photoautotrophy
Photoautotrophy
1
Photoautotrophy
Phototrophy
1
Phototrophy
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