SRR16109788 - Dicentrarchus labrax
Basic Information
Run: SRR16109788
Assay Type: AMPLICON
Biosample: SAMN21893832
Bytes: 4678997
Center Name: JMF
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA767204
Geographic Information
Country: Portugal
Continent: Europe
Location Name: Portugal: Porto
Latitude/Longitude: 41.1636 N 8.6866 W
Sample Information
Environmental Information
Broad Scale: fish
Local Scale: gut
Medium: gut digesta
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR16109788
4.5 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
15
Chemoheterotrophy
Aerobic_Chemoheterotrophy
11
Aerobic_Chemoheterotrophy
Aromatic_Compound_Degradation
4
Aromatic_Compound_Degradation
Fermentation
3
Fermentation
Ureolysis
2
Ureolysis
Methanol_Oxidation
1
Methanol_Oxidation
Methylotrophy
1
Methylotrophy
Nitrogen_Fixation
1
Nitrogen_Fixation
Aromatic_Hydrocarbon_Degradation
1
Aromatic_Hydrocarbon_Degradation
Hydrocarbon_Degradation
1
Hydrocarbon_Degradation
Nitrate_Reduction
1
Nitrate_Reduction
Predatory_Or_Exoparasitic
1
Predatory_Or_Exoparasitic
Nonphotosynthetic_Cyanobacteria
1
Nonphotosynthetic_Cyanobacteria
Photosynthetic_Cyanobacteria
1
Photosynthetic_Cyanobacteria
Oxygenic_Photoautotrophy
1
Oxygenic_Photoautotrophy
Photoautotrophy
1
Photoautotrophy
Phototrophy
1
Phototrophy
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