SRR16109767 - Dicentrarchus labrax
Basic Information
Run: SRR16109767
Assay Type: AMPLICON
Biosample: SAMN21893848
Bytes: 4657385
Center Name: JMF
Classification: 16S
Sequencing Information
Instrument: Illumina MiSeq
Library Layout: PAIRED
Bioproject: PRJNA767204
Geographic Information
Country: Portugal
Continent: Europe
Location Name: Portugal: Porto
Latitude/Longitude: 41.1636 N 8.6866 W
Sample Information
Environmental Information
Broad Scale: fish
Local Scale: gut
Medium: gut mucosa
Download Files
Analysis Files
Raw Sequencing Files
Direct download from NCBI SRA
Run ID
File Size
SRR16109767
4.4 MB
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Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.
Taxonomic Classification
Functional Annotation
Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.
Chemoheterotrophy
23
Chemoheterotrophy
Aerobic_Chemoheterotrophy
15
Aerobic_Chemoheterotrophy
Fermentation
8
Fermentation
Aromatic_Compound_Degradation
4
Aromatic_Compound_Degradation
Animal_Parasites_Or_Symbionts
3
Animal_Parasites_Or_Symbionts
Ureolysis
3
Ureolysis
Human_Pathogens_All
2
Human_Pathogens_All
Human_Associated
2
Human_Associated
Nitrate_Reduction
2
Nitrate_Reduction
Methanol_Oxidation
1
Methanol_Oxidation
Methylotrophy
1
Methylotrophy
Human_Pathogens_Septicemia
1
Human_Pathogens_Septicemia
Human_Pathogens_Meningitis
1
Human_Pathogens_Meningitis
Aromatic_Hydrocarbon_Degradation
1
Aromatic_Hydrocarbon_Degradation
Hydrocarbon_Degradation
1
Hydrocarbon_Degradation
Predatory_Or_Exoparasitic
1
Predatory_Or_Exoparasitic
Nonphotosynthetic_Cyanobacteria
1
Nonphotosynthetic_Cyanobacteria
Photosynthetic_Cyanobacteria
1
Photosynthetic_Cyanobacteria
Oxygenic_Photoautotrophy
1
Oxygenic_Photoautotrophy
Photoautotrophy
1
Photoautotrophy
Phototrophy
1
Phototrophy
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