SRR16095251 - Apiomorpha floralis

Basic Information

Run: SRR16095251

Assay Type: AMPLICON

Biosample: SAMN21874044

Bytes: 13983508

Center Name: THE UNIVERSITY OF QUEENSLAND

Classification: 16S,MLST,wsp,COI,etc.

Sequencing Information

Instrument: Illumina MiSeq

Library Layout: PAIRED

Bioproject: PRJNA766752

Geographic Information

Country: Australia

Continent: Oceania

Location Name: Australia

Sample Information

Host: Apiomorpha floralis

Isolation: -

Biosample Model: -

Collection Date: 2020-01-01

Host Sex: -

Environmental Information

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Analysis Files

OTU Table

Operational Taxonomic Unit table

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OTU Sequences

FASTA file of OTU sequences

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FAPROTAX Report

Functional annotation of Amplicon

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VSEARCH Taxon

VSEARCH taxonomic composition classification

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QIIME Taxon

QIIME2 taxonomic composition classification

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Raw Sequencing Files

Direct download from NCBI SRA
Run ID File Size
SRR16095251
13.3 MB Download

Raw sequencing files are hosted on NCBI SRA. Click the download button to start downloading directly from NCBI servers.

Taxonomic Classification

Functional Annotation

Functional annotations are predicted using FAPROTAX (Functional Annotation of Prokaryotic Taxa). Each number indicates the count of taxa associated with that specific function.

Intracellular_Parasites 26
Methanol_Oxidation 1
Methylotrophy 1
Nitrate_Denitrification 1
Nitrite_Denitrification 1
Denitrification 1
Dark_Hydrogen_Oxidation 1
Nitrite_Respiration 1
Aerobic_Chemoheterotrophy 1
Nitrate_Respiration 1
Nitrate_Reduction 1
Nitrogen_Respiration 1
Chemoheterotrophy 1
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